Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-1P78426 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-1P78426 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
NKX6-1P78426 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX6-1P78426 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.09□□□□□ -0.15
NKX6-1P78426 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.09□□□□□ -0.15
NKX6-1P78426 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.09□□□□□ -0.15
NKX6-1P78426 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.09□□□□□ -0.15
NKX6-1P78426 TP53TG3HP-202ENST00000569755 579 ntBASIC14.09□□□□□ -0.15
NKX6-1P78426 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 AC007967.4-201ENST00000614700 386 ntBASIC14.09□□□□□ -0.15
NKX6-1P78426 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 AC007541.1-201ENST00000570282 1469 ntBASIC14.09□□□□□ -0.15
NKX6-1P78426 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 AL589702.1-201ENST00000641229 1509 ntBASIC14.09□□□□□ -0.15
NKX6-1P78426 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NKX6-1P78426 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX6-1P78426 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX6-1P78426 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.08□□□□□ -0.15
NKX6-1P78426 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.08□□□□□ -0.16
NKX6-1P78426 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 AC138969.3-201ENST00000546612 1459 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 AC138932.2-201ENST00000548268 1459 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 AC126755.4-201ENST00000549796 1459 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 U91328.1-201ENST00000437528 223 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.08□□□□□ -0.16
NKX6-1P78426 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 HLA-V-204ENST00000476601 1289 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.08□□□□□ -0.16
NKX6-1P78426 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 MIR6799-201ENST00000620297 69 ntBASIC14.08□□□□□ -0.16
NKX6-1P78426 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NKX6-1P78426 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.08□□□□□ -0.16
NKX6-1P78426 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
NKX6-1P78426 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.08□□□□□ -0.16
NKX6-1P78426 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX6-1P78426 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.08□□□□□ -0.16
NKX6-1P78426 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.08□□□□□ -0.16
NKX6-1P78426 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX6-1P78426 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-1P78426 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX6-1P78426 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-1P78426 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-1P78426 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-1P78426 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-1P78426 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.07□□□□□ -0.16
NKX6-1P78426 AC005622.1-201ENST00000636801 1703 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms