Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.83□□□□□ -0.2
UBA52P62987 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.83□□□□□ -0.2
UBA52P62987 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 PI4KAP1-204ENST00000612579 1703 ntBASIC13.83□□□□□ -0.2
UBA52P62987 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
UBA52P62987 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 FRMD8P1-201ENST00000440433 1524 ntBASIC13.83□□□□□ -0.2
UBA52P62987 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 CICP24-201ENST00000605464 2705 ntBASIC13.83□□□□□ -0.2
UBA52P62987 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.83□□□□□ -0.2
UBA52P62987 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBA52P62987 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UBA52P62987 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.82□□□□□ -0.2
UBA52P62987 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
UBA52P62987 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 AL139400.1-201ENST00000366220 510 ntBASIC13.82□□□□□ -0.2
UBA52P62987 MYCLP1-201ENST00000372451 1075 ntBASIC13.82□□□□□ -0.2
UBA52P62987 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.82□□□□□ -0.2
UBA52P62987 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.82□□□□□ -0.2
UBA52P62987 CXCL1P1-201ENST00000502804 216 ntBASIC13.82□□□□□ -0.2
UBA52P62987 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.82□□□□□ -0.2
UBA52P62987 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.82□□□□□ -0.2
UBA52P62987 SPCS2P1-201ENST00000561636 679 ntBASIC13.82□□□□□ -0.2
UBA52P62987 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.82□□□□□ -0.2
UBA52P62987 AC068137.2-201ENST00000605408 478 ntBASIC13.82□□□□□ -0.2
UBA52P62987 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
UBA52P62987 AL513210.1-201ENST00000629608 234 ntBASIC13.82□□□□□ -0.2
UBA52P62987 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBA52P62987 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.82□□□□□ -0.2
UBA52P62987 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
UBA52P62987 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.82□□□□□ -0.2
UBA52P62987 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.82□□□□□ -0.2
UBA52P62987 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBA52P62987 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
UBA52P62987 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.81□□□□□ -0.2
UBA52P62987 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
UBA52P62987 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBA52P62987 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.81□□□□□ -0.2
UBA52P62987 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBA52P62987 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.81□□□□□ -0.2
UBA52P62987 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.81□□□□□ -0.2
UBA52P62987 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms