Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB11AP62491 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB11AP62491 AC006504.4-201ENST00000592118 1568 ntBASIC13.02□□□□□ -0.33
RAB11AP62491 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB11AP62491 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB11AP62491 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB11AP62491 TMBIM7P-203ENST00000641617 1718 ntBASIC13.02□□□□□ -0.33
RAB11AP62491 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB11AP62491 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
RAB11AP62491 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB11AP62491 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
RAB11AP62491 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 HAUS4P1-201ENST00000406739 1145 ntBASIC13.01□□□□□ -0.33
RAB11AP62491 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 RPS15P9-201ENST00000494093 319 ntBASIC13.01□□□□□ -0.33
RAB11AP62491 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.01□□□□□ -0.33
RAB11AP62491 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB11AP62491 AC008608.2-201ENST00000606089 416 ntBASIC13.01□□□□□ -0.33
RAB11AP62491 AL732292.2-201ENST00000609649 430 ntBASIC13.01□□□□□ -0.33
RAB11AP62491 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB11AP62491 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB11AP62491 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RAB11AP62491 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB11AP62491 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB11AP62491 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
RAB11AP62491 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13□□□□□ -0.33
RAB11AP62491 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13□□□□□ -0.33
RAB11AP62491 CD99-202ENST00000381180 530 ntTSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 KRT18P21-201ENST00000515767 1272 ntBASIC13□□□□□ -0.33
RAB11AP62491 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 SART3-203ENST00000546611 1184 ntBASIC13□□□□□ -0.33
RAB11AP62491 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RAB11AP62491 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 AL121772.3-201ENST00000610840 674 ntBASIC13□□□□□ -0.33
RAB11AP62491 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAB11AP62491 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB11AP62491 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB11AP62491 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms