Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SEC61A1P61619 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC61A1P61619 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC61A1P61619 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SEC61A1P61619 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 TOP3BP1-201ENST00000420768 1380 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 AC006486.2-201ENST00000624246 2199 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 HMGA1P7-201ENST00000406908 502 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.01□□□□□ -0.17
SEC61A1P61619 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.01□□□□□ -0.17
SEC61A1P61619 SNHG9-202ENST00000564014 471 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.01□□□□□ -0.17
SEC61A1P61619 MIR4515-201ENST00000584082 81 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 AC079781.4-201ENST00000641908 219 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 AL645728.2-201ENST00000641974 660 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 AC007292.2-201ENST00000593524 1812 ntBASIC14.01□□□□□ -0.17
SEC61A1P61619 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC61A1P61619 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC61A1P61619 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SEC61A1P61619 AC012569.1-201ENST00000591191 1524 ntBASIC14□□□□□ -0.17
SEC61A1P61619 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SEC61A1P61619 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SEC61A1P61619 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SEC61A1P61619 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14□□□□□ -0.17
SEC61A1P61619 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SEC61A1P61619 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14□□□□□ -0.17
SEC61A1P61619 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14□□□□□ -0.17
SEC61A1P61619 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SEC61A1P61619 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SEC61A1P61619 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14□□□□□ -0.17
SEC61A1P61619 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SEC61A1P61619 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14□□□□□ -0.17
SEC61A1P61619 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14□□□□□ -0.17
SEC61A1P61619 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14□□□□□ -0.17
SEC61A1P61619 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14□□□□□ -0.17
SEC61A1P61619 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14□□□□□ -0.17
SEC61A1P61619 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms