Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
AP3S2P59780 PRYP5-201ENST00000451909 266 ntBASIC13.72□□□□□ -0.21
AP3S2P59780 AC096582.2-201ENST00000510860 516 ntBASIC13.72□□□□□ -0.21
AP3S2P59780 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.72□□□□□ -0.21
AP3S2P59780 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
AP3S2P59780 AL365330.1-201ENST00000607459 531 ntBASIC13.72□□□□□ -0.21
AP3S2P59780 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.72□□□□□ -0.21
AP3S2P59780 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.72□□□□□ -0.21
AP3S2P59780 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
AP3S2P59780 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.72□□□□□ -0.21
AP3S2P59780 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 WASH6P-202ENST00000359512 1437 ntBASIC13.72□□□□□ -0.21
AP3S2P59780 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
AP3S2P59780 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
AP3S2P59780 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S2P59780 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AP3S2P59780 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
AP3S2P59780 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
AP3S2P59780 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AP3S2P59780 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 RNF152P1-201ENST00000397754 604 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 MIR935-201ENST00000401179 91 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.71□□□□□ -0.21
AP3S2P59780 TSPY5P-201ENST00000426936 936 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 TSPY15P-201ENST00000457163 923 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 KRT8P26-201ENST00000534154 1276 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.71□□□□□ -0.21
AP3S2P59780 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
AP3S2P59780 AC010203.1-204ENST00000548782 407 ntBASIC13.71□□□□□ -0.21
AP3S2P59780 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.71□□□□□ -0.21
AP3S2P59780 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.71□□□□□ -0.21
AP3S2P59780 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.71□□□□□ -0.21
AP3S2P59780 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
AP3S2P59780 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S2P59780 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S2P59780 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S2P59780 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S2P59780 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
AP3S2P59780 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S2P59780 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.71□□□□□ -0.22
AP3S2P59780 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S2P59780 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S2P59780 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S2P59780 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.71□□□□□ -0.22
AP3S2P59780 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 DMBT1P1-203ENST00000636837 4628 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 BEND3P1-201ENST00000421591 1944 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP3S2P59780 PTENP1-202ENST00000532280 3996 ntBASIC13.7□□□□□ -0.22
AP3S2P59780 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.7□□□□□ -0.22
AP3S2P59780 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S2P59780 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms