Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.84■□□□□ 0.45
VEGFBP49765 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.84■□□□□ 0.45
VEGFBP49765 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.84■□□□□ 0.45
VEGFBP49765 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.84■□□□□ 0.45
VEGFBP49765 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.84■□□□□ 0.45
VEGFBP49765 AC026803.1-201ENST00000569130 274 ntBASIC17.84■□□□□ 0.45
VEGFBP49765 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.84■□□□□ 0.45
VEGFBP49765 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.84■□□□□ 0.45
VEGFBP49765 AC244250.3-201ENST00000620749 366 ntBASIC17.84■□□□□ 0.45
VEGFBP49765 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
VEGFBP49765 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.84■□□□□ 0.45
VEGFBP49765 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.84■□□□□ 0.45
VEGFBP49765 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
VEGFBP49765 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VEGFBP49765 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VEGFBP49765 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VEGFBP49765 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 AL139094.1-201ENST00000405549 1188 ntBASIC17.83■□□□□ 0.44
VEGFBP49765 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.83■□□□□ 0.44
VEGFBP49765 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.83■□□□□ 0.44
VEGFBP49765 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.83■□□□□ 0.44
VEGFBP49765 AP003398.1-201ENST00000531124 318 ntBASIC17.83■□□□□ 0.44
VEGFBP49765 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.83■□□□□ 0.44
VEGFBP49765 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.83■□□□□ 0.44
VEGFBP49765 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.83■□□□□ 0.44
VEGFBP49765 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.83■□□□□ 0.44
VEGFBP49765 LINC00431-202ENST00000636375 159 ntBASIC17.83■□□□□ 0.44
VEGFBP49765 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VEGFBP49765 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VEGFBP49765 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VEGFBP49765 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 AP001282.1-201ENST00000531301 1499 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VEGFBP49765 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VEGFBP49765 FAM90A2P-201ENST00000511144 1395 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 FAM90A25P-201ENST00000528404 1395 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VEGFBP49765 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.82■□□□□ 0.44
VEGFBP49765 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 RPL18AP3-201ENST00000462885 528 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 RN7SL258P-201ENST00000478664 300 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.82■□□□□ 0.44
VEGFBP49765 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.82■□□□□ 0.44
VEGFBP49765 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 AC100827.2-201ENST00000563214 1194 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 MIR5196-201ENST00000578146 115 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.82■□□□□ 0.44
VEGFBP49765 AC105137.3-201ENST00000617588 984 ntBASIC17.82■□□□□ 0.44
VEGFBP49765 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.82■□□□□ 0.44
VEGFBP49765 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.82■□□□□ 0.44
VEGFBP49765 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.82■□□□□ 0.44
VEGFBP49765 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VEGFBP49765 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFBP49765 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VEGFBP49765 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFBP49765 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VEGFBP49765 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFBP49765 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFBP49765 Z69890.1-201ENST00000382990 339 ntBASIC17.81■□□□□ 0.44
VEGFBP49765 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VEGFBP49765 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.81■□□□□ 0.44
VEGFBP49765 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.81■□□□□ 0.44
VEGFBP49765 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.81■□□□□ 0.44
VEGFBP49765 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms