Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP13P45452 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP13P45452 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP13P45452 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP13P45452 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MMP13P45452 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MMP13P45452 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP13P45452 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP13P45452 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP13P45452 SNX18-202ENST00000343017 3140 ntBASIC16.58■□□□□ 0.24
MMP13P45452 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
MMP13P45452 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MMP13P45452 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP13P45452 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
MMP13P45452 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
MMP13P45452 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 HLA-H-201ENST00000383620 1096 ntBASIC16.57■□□□□ 0.24
MMP13P45452 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MMP13P45452 RNA5SP410-201ENST00000516285 106 ntBASIC16.57■□□□□ 0.24
MMP13P45452 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.57■□□□□ 0.24
MMP13P45452 AC024267.1-201ENST00000582320 895 ntBASIC16.57■□□□□ 0.24
MMP13P45452 AC079781.4-201ENST00000641908 219 ntBASIC16.57■□□□□ 0.24
MMP13P45452 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP13P45452 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP13P45452 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP13P45452 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MMP13P45452 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 FAM220BP-201ENST00000377689 816 ntBASIC16.56■□□□□ 0.24
MMP13P45452 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 FAM58DP-201ENST00000428076 619 ntBASIC16.56■□□□□ 0.24
MMP13P45452 AC023141.5-201ENST00000458585 616 ntBASIC16.56■□□□□ 0.24
MMP13P45452 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP13P45452 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP13P45452 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP13P45452 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 MIR4321-201ENST00000592276 80 ntBASIC16.56■□□□□ 0.24
MMP13P45452 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP13P45452 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
MMP13P45452 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP13P45452 AC106881.1-201ENST00000605849 3329 ntBASIC16.56■□□□□ 0.24
MMP13P45452 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP13P45452 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MMP13P45452 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP13P45452 AC008677.1-201ENST00000519230 1561 ntBASIC16.55■□□□□ 0.24
MMP13P45452 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MMP13P45452 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MMP13P45452 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP13P45452 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP13P45452 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms