Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
MTHFRP42898 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
MTHFRP42898 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.6■□□□□ 0.25
MTHFRP42898 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MTHFRP42898 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
MTHFRP42898 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
MTHFRP42898 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 AC004945.1-201ENST00000416738 983 ntBASIC16.59■□□□□ 0.25
MTHFRP42898 GPAA1P2-201ENST00000417923 928 ntBASIC16.59■□□□□ 0.25
MTHFRP42898 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 AP001063.1-201ENST00000568332 529 ntBASIC16.59■□□□□ 0.25
MTHFRP42898 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 AL049840.4-201ENST00000602422 811 ntBASIC16.59■□□□□ 0.25
MTHFRP42898 RHOXF1P1-202ENST00000635473 501 ntBASIC16.59■□□□□ 0.25
MTHFRP42898 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 FER1L4-210ENST00000615531 5998 ntBASIC16.59■□□□□ 0.25
MTHFRP42898 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
MTHFRP42898 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MTHFRP42898 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MTHFRP42898 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MTHFRP42898 AC060834.1-201ENST00000443027 2032 ntBASIC16.58■□□□□ 0.25
MTHFRP42898 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MTHFRP42898 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
MTHFRP42898 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.58■□□□□ 0.25
MTHFRP42898 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MTHFRP42898 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MTHFRP42898 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MTHFRP42898 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
MTHFRP42898 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 AC074338.1-201ENST00000416825 156 ntBASIC16.58■□□□□ 0.24
MTHFRP42898 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.58■□□□□ 0.24
MTHFRP42898 GOLGA2P4-201ENST00000441462 777 ntBASIC16.58■□□□□ 0.24
MTHFRP42898 AC012441.1-201ENST00000446669 685 ntBASIC16.58■□□□□ 0.24
MTHFRP42898 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.58■□□□□ 0.24
MTHFRP42898 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.58■□□□□ 0.24
MTHFRP42898 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
MTHFRP42898 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.58■□□□□ 0.24
MTHFRP42898 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 AC134312.5-201ENST00000568031 1313 ntBASIC16.58■□□□□ 0.24
MTHFRP42898 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MTHFRP42898 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.58■□□□□ 0.24
MTHFRP42898 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MTHFRP42898 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.58■□□□□ 0.24
MTHFRP42898 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MTHFRP42898 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
MTHFRP42898 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.58■□□□□ 0.24
MTHFRP42898 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms