Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
TOP2AP11388 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TOP2AP11388 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
TOP2AP11388 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
TOP2AP11388 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TOP2AP11388 CYP46A4P-201ENST00000414953 267 ntBASIC27.14■■□□□ 1.94
TOP2AP11388 ATP6V0CP2-201ENST00000469409 207 ntBASIC27.14■■□□□ 1.94
TOP2AP11388 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TOP2AP11388 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TOP2AP11388 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC27.14■■□□□ 1.93
TOP2AP11388 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TOP2AP11388 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC27.13■■□□□ 1.93
TOP2AP11388 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 ANKRD30BP2-201ENST00000435744 1610 ntBASIC27.13■■□□□ 1.93
TOP2AP11388 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
TOP2AP11388 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC27.13■■□□□ 1.93
TOP2AP11388 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC27.13■■□□□ 1.93
TOP2AP11388 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC27.13■■□□□ 1.93
TOP2AP11388 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC27.13■■□□□ 1.93
TOP2AP11388 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
TOP2AP11388 NAT9-224ENST00000583757 583 ntTSL 3 BASIC27.13■■□□□ 1.93
TOP2AP11388 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC27.13■■□□□ 1.93
TOP2AP11388 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
TOP2AP11388 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
TOP2AP11388 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
TOP2AP11388 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
TOP2AP11388 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC27.12■■□□□ 1.93
TOP2AP11388 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC27.12■■□□□ 1.93
TOP2AP11388 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC27.12■■□□□ 1.93
TOP2AP11388 PTPA-217ENST00000434095 870 ntTSL 2 BASIC27.12■■□□□ 1.93
TOP2AP11388 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
TOP2AP11388 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC27.12■■□□□ 1.93
TOP2AP11388 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC27.12■■□□□ 1.93
TOP2AP11388 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC27.12■■□□□ 1.93
TOP2AP11388 KLK3-207ENST00000595952 969 ntTSL 3 BASIC27.12■■□□□ 1.93
TOP2AP11388 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC27.12■■□□□ 1.93
TOP2AP11388 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC27.12■■□□□ 1.93
TOP2AP11388 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC27.12■■□□□ 1.93
TOP2AP11388 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC27.12■■□□□ 1.93
TOP2AP11388 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 AC018695.7-201ENST00000624587 2492 ntBASIC27.12■■□□□ 1.93
TOP2AP11388 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
TOP2AP11388 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC27.12■■□□□ 1.93
TOP2AP11388 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
TOP2AP11388 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC27.11■■□□□ 1.93
TOP2AP11388 HINT2P1-201ENST00000419438 481 ntBASIC27.11■■□□□ 1.93
TOP2AP11388 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC27.11■■□□□ 1.93
TOP2AP11388 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC27.11■■□□□ 1.93
TOP2AP11388 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC27.11■■□□□ 1.93
TOP2AP11388 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TOP2AP11388 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TOP2AP11388 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC27.11■■□□□ 1.93
TOP2AP11388 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
TOP2AP11388 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TOP2AP11388 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
TOP2AP11388 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TOP2AP11388 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TOP2AP11388 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 AL596087.1-201ENST00000400979 1969 ntBASIC27.11■■□□□ 1.93
TOP2AP11388 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
TOP2AP11388 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC27.11■■□□□ 1.93
TOP2AP11388 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TOP2AP11388 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC27.11■■□□□ 1.93
TOP2AP11388 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 DUX4L47-201ENST00000566374 394 ntBASIC27.11■■□□□ 1.93
TOP2AP11388 NAT9-222ENST00000583476 583 ntTSL 3 BASIC27.11■■□□□ 1.93
TOP2AP11388 AC004466.1-201ENST00000599515 1080 ntBASIC27.11■■□□□ 1.93
TOP2AP11388 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC27.11■■□□□ 1.93
TOP2AP11388 PGR-209ENST00000617858 2816 ntTSL 5 BASIC27.1■■□□□ 1.93
TOP2AP11388 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TOP2AP11388 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TOP2AP11388 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC27.1■■□□□ 1.93
TOP2AP11388 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TOP2AP11388 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC27.1■■□□□ 1.93
TOP2AP11388 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC27.1■■□□□ 1.93
TOP2AP11388 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TOP2AP11388 GGCT-203ENST00000409144 836 ntTSL 2 BASIC27.1■■□□□ 1.93
TOP2AP11388 ACTG1P2-201ENST00000415776 1125 ntBASIC27.1■■□□□ 1.93
TOP2AP11388 ACTG1P11-201ENST00000425411 1125 ntBASIC27.1■■□□□ 1.93
TOP2AP11388 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms