Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.28□□□□□ -0.28
IGHV3-43DP0DP04 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 AL596257.1-201ENST00000641463 2694 ntBASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGHV3-43DP0DP04 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AC018892.3-201ENST00000623986 2499 ntBASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 CEND1P1-201ENST00000451006 455 ntBASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AP000842.3-202ENST00000569238 1080 ntBASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AC061975.2-201ENST00000581722 295 ntBASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AP001282.1-201ENST00000531301 1499 ntBASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 MYO15B-237ENST00000642007 4893 ntBASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV3-43DP0DP04 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AL592309.1-201ENST00000443127 649 ntBASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AC092127.1-201ENST00000567093 3455 ntBASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV3-43DP0DP04 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms