Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOC3P02656 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 AC011477.6-201ENST00000604980 1927 ntBASIC12.78□□□□□ -0.36
APOC3P02656 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC3P02656 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC3P02656 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
APOC3P02656 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC3P02656 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
APOC3P02656 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC3P02656 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC3P02656 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
APOC3P02656 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC3P02656 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC3P02656 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.77□□□□□ -0.37
APOC3P02656 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.77□□□□□ -0.37
APOC3P02656 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC3P02656 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
APOC3P02656 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC3P02656 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC3P02656 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
APOC3P02656 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
APOC3P02656 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC3P02656 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.76□□□□□ -0.37
APOC3P02656 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC3P02656 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.76□□□□□ -0.37
APOC3P02656 AC060766.5-201ENST00000590539 871 ntBASIC12.76□□□□□ -0.37
APOC3P02656 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
APOC3P02656 CR769767.2-201ENST00000622735 460 ntBASIC12.76□□□□□ -0.37
APOC3P02656 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC3P02656 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC3P02656 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC3P02656 AL135905.2-201ENST00000584934 1404 ntBASIC12.76□□□□□ -0.37
APOC3P02656 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms