Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC10.38□□□□□ -0.75
TRACP01848 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 CCR12P-201ENST00000446203 998 ntBASIC10.38□□□□□ -0.75
TRACP01848 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 AC116562.2-201ENST00000507042 360 ntBASIC10.38□□□□□ -0.75
TRACP01848 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC10.38□□□□□ -0.75
TRACP01848 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 SIGLEC29P-201ENST00000599873 1114 ntBASIC10.38□□□□□ -0.75
TRACP01848 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC10.38□□□□□ -0.75
TRACP01848 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 DGCR9-201ENST00000609630 2415 ntBASIC10.38□□□□□ -0.75
TRACP01848 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
TRACP01848 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC10.37□□□□□ -0.75
TRACP01848 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 AC011477.6-201ENST00000604980 1927 ntBASIC10.37□□□□□ -0.75
TRACP01848 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.37□□□□□ -0.75
TRACP01848 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRACP01848 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.37□□□□□ -0.75
TRACP01848 ACTG1P4-201ENST00000425123 1122 ntBASIC10.37□□□□□ -0.75
TRACP01848 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
TRACP01848 KRT18P48-201ENST00000434763 852 ntBASIC10.37□□□□□ -0.75
TRACP01848 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC10.37□□□□□ -0.75
TRACP01848 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC10.37□□□□□ -0.75
TRACP01848 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC10.37□□□□□ -0.75
TRACP01848 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms