Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF11O60813 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF11O60813 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 TOMM22P5-201ENST00000416399 439 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 FAM207CP-201ENST00000443486 507 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 AL589987.1-201ENST00000453380 819 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 SERBP1P5-201ENST00000510079 1181 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 AC004790.1-201ENST00000612686 536 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 AC009118.2-201ENST00000613275 655 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 AC092127.1-201ENST00000567093 3455 ntBASIC16.06■□□□□ 0.16
PRAMEF11O60813 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF11O60813 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF11O60813 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 SPTLC1P1-201ENST00000447199 261 ntBASIC16.05■□□□□ 0.16
PRAMEF11O60813 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 RN7SL204P-201ENST00000582831 262 ntBASIC16.05■□□□□ 0.16
PRAMEF11O60813 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF11O60813 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 PAUPAR-201ENST00000630360 2965 ntBASIC16.05■□□□□ 0.16
PRAMEF11O60813 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF11O60813 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms