Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.21■□□□□ 0.35
EXTL3O43909 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.21■□□□□ 0.35
EXTL3O43909 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.21■□□□□ 0.35
EXTL3O43909 LINC01115-203ENST00000606068 577 ntBASIC17.21■□□□□ 0.35
EXTL3O43909 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.21■□□□□ 0.35
EXTL3O43909 AC004461.2-201ENST00000629517 803 ntBASIC17.21■□□□□ 0.35
EXTL3O43909 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXTL3O43909 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.21■□□□□ 0.35
EXTL3O43909 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.21■□□□□ 0.35
EXTL3O43909 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXTL3O43909 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.21■□□□□ 0.35
EXTL3O43909 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXTL3O43909 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EXTL3O43909 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EXTL3O43909 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.21■□□□□ 0.34
EXTL3O43909 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.21■□□□□ 0.34
EXTL3O43909 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.21■□□□□ 0.34
EXTL3O43909 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
EXTL3O43909 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EXTL3O43909 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.2■□□□□ 0.34
EXTL3O43909 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
EXTL3O43909 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.2■□□□□ 0.34
EXTL3O43909 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.2■□□□□ 0.34
EXTL3O43909 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.2■□□□□ 0.34
EXTL3O43909 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.2■□□□□ 0.34
EXTL3O43909 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.2■□□□□ 0.34
EXTL3O43909 TERF1P3-201ENST00000505638 1227 ntBASIC17.2■□□□□ 0.34
EXTL3O43909 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.2■□□□□ 0.34
EXTL3O43909 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.2■□□□□ 0.34
EXTL3O43909 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.2■□□□□ 0.34
EXTL3O43909 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.2■□□□□ 0.34
EXTL3O43909 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.2■□□□□ 0.34
EXTL3O43909 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.2■□□□□ 0.34
EXTL3O43909 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXTL3O43909 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.19■□□□□ 0.34
EXTL3O43909 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.19■□□□□ 0.34
EXTL3O43909 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.19■□□□□ 0.34
EXTL3O43909 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.19■□□□□ 0.34
EXTL3O43909 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.19■□□□□ 0.34
EXTL3O43909 SLED1-202ENST00000512051 380 ntBASIC17.19■□□□□ 0.34
EXTL3O43909 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.19■□□□□ 0.34
EXTL3O43909 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXTL3O43909 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.19■□□□□ 0.34
EXTL3O43909 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
EXTL3O43909 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.19■□□□□ 0.34
EXTL3O43909 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms