Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ACTN4O43707 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.84■□□□□ 0.45
ACTN4O43707 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ACTN4O43707 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 AC004461.1-201ENST00000412461 403 ntBASIC17.84■□□□□ 0.45
ACTN4O43707 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.84■□□□□ 0.45
ACTN4O43707 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.84■□□□□ 0.45
ACTN4O43707 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 ALG1L8P-201ENST00000533887 760 ntBASIC17.84■□□□□ 0.45
ACTN4O43707 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.84■□□□□ 0.45
ACTN4O43707 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.84■□□□□ 0.45
ACTN4O43707 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.84■□□□□ 0.45
ACTN4O43707 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.84■□□□□ 0.45
ACTN4O43707 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.84■□□□□ 0.45
ACTN4O43707 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.84■□□□□ 0.45
ACTN4O43707 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ACTN4O43707 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.83■□□□□ 0.45
ACTN4O43707 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ACTN4O43707 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ACTN4O43707 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
ACTN4O43707 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ACTN4O43707 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.83■□□□□ 0.45
ACTN4O43707 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ACTN4O43707 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.83■□□□□ 0.45
ACTN4O43707 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ACTN4O43707 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
ACTN4O43707 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.83■□□□□ 0.44
ACTN4O43707 AZGP1P1-201ENST00000411909 902 ntBASIC17.83■□□□□ 0.44
ACTN4O43707 AL627223.1-201ENST00000416693 442 ntBASIC17.83■□□□□ 0.44
ACTN4O43707 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.83■□□□□ 0.44
ACTN4O43707 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.83■□□□□ 0.44
ACTN4O43707 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.83■□□□□ 0.44
ACTN4O43707 MIR4469-201ENST00000583919 79 ntBASIC17.83■□□□□ 0.44
ACTN4O43707 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 AC026979.3-201ENST00000607315 403 ntBASIC17.83■□□□□ 0.44
ACTN4O43707 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
ACTN4O43707 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.83■□□□□ 0.44
ACTN4O43707 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ACTN4O43707 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ACTN4O43707 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.83■□□□□ 0.44
ACTN4O43707 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.83■□□□□ 0.44
ACTN4O43707 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ACTN4O43707 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ACTN4O43707 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.82■□□□□ 0.44
ACTN4O43707 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.82■□□□□ 0.44
ACTN4O43707 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.82■□□□□ 0.44
ACTN4O43707 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.82■□□□□ 0.44
ACTN4O43707 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.82■□□□□ 0.44
ACTN4O43707 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
ACTN4O43707 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms