Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UPK1AO00322 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK1AO00322 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1AO00322 RNA5SP410-201ENST00000516285 106 ntBASIC15.1■□□□□ 0.01
UPK1AO00322 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK1AO00322 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK1AO00322 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK1AO00322 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK1AO00322 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.1■□□□□ 0.01
UPK1AO00322 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK1AO00322 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1AO00322 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK1AO00322 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1AO00322 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UPK1AO00322 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1AO00322 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 HLA-H-201ENST00000383620 1096 ntBASIC15.09■□□□□ 0.01
UPK1AO00322 AC004461.1-201ENST00000412461 403 ntBASIC15.09■□□□□ 0.01
UPK1AO00322 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.09■□□□□ 0.01
UPK1AO00322 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UPK1AO00322 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
UPK1AO00322 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1AO00322 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1AO00322 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1AO00322 AP001282.1-201ENST00000531301 1499 ntBASIC15.08■□□□□ 0.01
UPK1AO00322 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.08■□□□□ 0.01
UPK1AO00322 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
UPK1AO00322 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1AO00322 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
UPK1AO00322 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
UPK1AO00322 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
UPK1AO00322 AP3S2-216ENST00000617003 1561 ntBASIC15.08■□□□□ 0
UPK1AO00322 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 AC134407.2-201ENST00000625089 1978 ntBASIC15.08■□□□□ 0
UPK1AO00322 AC005237.2-201ENST00000434368 219 ntBASIC15.08■□□□□ 0
UPK1AO00322 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.08■□□□□ 0
UPK1AO00322 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.08■□□□□ 0
UPK1AO00322 AC092865.5-201ENST00000545435 363 ntBASIC15.08■□□□□ 0
UPK1AO00322 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.08■□□□□ 0
UPK1AO00322 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.08■□□□□ 0
UPK1AO00322 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.08■□□□□ 0
UPK1AO00322 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
UPK1AO00322 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UPK1AO00322 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms