Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 AC012569.1-201ENST00000591191 1524 ntBASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DDX49Q9Y6V7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX49Q9Y6V7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AC069224.1-201ENST00000566372 1715 ntBASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 RARRES2P8-201ENST00000566335 367 ntBASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AC092364.2-202ENST00000597012 1073 ntBASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 AL009183.1-201ENST00000603760 355 ntBASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX49Q9Y6V7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms