Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA9Q9Y5G4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 MIR658-201ENST00000385210 100 ntBASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AC022210.1-201ENST00000449856 793 ntBASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 PAUPAR-201ENST00000630360 2965 ntBASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AL109936.8-201ENST00000641772 604 ntBASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AL391256.1-201ENST00000443260 1855 ntBASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA9Q9Y5G4 GPAA1P2-202ENST00000606848 1787 ntBASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 AL512652.2-201ENST00000625156 1716 ntBASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 AC007389.4-201ENST00000454674 793 ntBASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ELK1P1-201ENST00000485699 580 ntBASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms