Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 AC087386.2-201ENST00000623212 4637 ntBASIC15.11■□□□□ 0.01
AP4S1Q9Y587 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 AC012306.2-201ENST00000609350 630 ntBASIC15.11■□□□□ 0.01
AP4S1Q9Y587 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.11■□□□□ 0.01
AP4S1Q9Y587 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 WASH6P-202ENST00000359512 1437 ntBASIC15.1■□□□□ 0.01
AP4S1Q9Y587 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AP001282.1-201ENST00000531301 1499 ntBASIC15.1■□□□□ 0.01
AP4S1Q9Y587 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AC139887.3-201ENST00000568585 713 ntBASIC15.1■□□□□ 0.01
AP4S1Q9Y587 NKAPP1-205ENST00000585790 367 ntBASIC15.1■□□□□ 0.01
AP4S1Q9Y587 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 AC133561.5-201ENST00000635547 218 ntBASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
AP4S1Q9Y587 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP4S1Q9Y587 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms