Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 AC140113.2-201ENST00000604370 208 ntBASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 AC064836.3-201ENST00000607928 673 ntBASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 SBF1P1-201ENST00000444527 5631 ntBASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 AC112504.1-201ENST00000623415 1841 ntBASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
R3HCC1Q9Y3T6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 GGT4P-201ENST00000623672 1708 ntBASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 MIR574-201ENST00000385209 96 ntBASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3HCC1Q9Y3T6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 TUBB8P12-201ENST00000308911 1335 ntBASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 TUBB7P-202ENST00000428444 1305 ntBASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 TUBB8P7-204ENST00000567960 1332 ntBASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 CXCL1P1-201ENST00000502804 216 ntBASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
R3HCC1Q9Y3T6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms