Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC009090.5-201ENST00000624886 2285 ntBASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 NKAPP1-205ENST00000585790 367 ntBASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AL139288.1-201ENST00000623748 933 ntBASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RCL1Q9Y2P8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.08□□□□□ -0.31
RCL1Q9Y2P8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AC005912.2-201ENST00000619492 2400 ntBASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 NUS1P2-201ENST00000417358 873 ntBASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AL805961.1-202ENST00000641562 540 ntBASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RCL1Q9Y2P8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms