Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 BTNL10-201ENST00000595971 695 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 AC017083.2-201ENST00000608069 979 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 AC005252.2-201ENST00000624630 1141 ntBASIC17.84■□□□□ 0.45
COL20A1Q9P218 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL20A1Q9P218 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.84■□□□□ 0.45
COL20A1Q9P218 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 DRD5P1-201ENST00000456605 1438 ntBASIC17.83■□□□□ 0.45
COL20A1Q9P218 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL20A1Q9P218 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
COL20A1Q9P218 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.83■□□□□ 0.45
COL20A1Q9P218 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.83■□□□□ 0.44
COL20A1Q9P218 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 SLC25A47P1-201ENST00000531577 414 ntBASIC17.83■□□□□ 0.44
COL20A1Q9P218 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COL20A1Q9P218 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL20A1Q9P218 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 AC018665.1-201ENST00000622927 1362 ntBASIC17.82■□□□□ 0.44
COL20A1Q9P218 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 MIR658-201ENST00000385210 100 ntBASIC17.82■□□□□ 0.44
COL20A1Q9P218 AL133267.1-201ENST00000398220 340 ntBASIC17.82■□□□□ 0.44
COL20A1Q9P218 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 AC026410.3-201ENST00000514280 936 ntBASIC17.82■□□□□ 0.44
COL20A1Q9P218 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 TDH-203ENST00000531764 1110 ntBASIC17.82■□□□□ 0.44
COL20A1Q9P218 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 MIR6775-201ENST00000617557 69 ntBASIC17.82■□□□□ 0.44
COL20A1Q9P218 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL20A1Q9P218 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.82■□□□□ 0.44
COL20A1Q9P218 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL20A1Q9P218 SOCS2P1-201ENST00000417727 557 ntBASIC17.81■□□□□ 0.44
COL20A1Q9P218 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.81■□□□□ 0.44
COL20A1Q9P218 AC233724.13-201ENST00000598383 410 ntBASIC17.81■□□□□ 0.44
COL20A1Q9P218 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms