Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AC138649.4-201ENST00000612222 287 ntBASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 TMBIM7P-203ENST00000641617 1718 ntBASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC104640.1-201ENST00000562617 2109 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 RPL13P2-201ENST00000440687 659 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 RN7SL618P-201ENST00000477850 296 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 RFPL4AP1-201ENST00000530883 850 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC044860.1-202ENST00000559481 777 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 LINC01115-203ENST00000606068 577 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC106028.4-201ENST00000614509 607 ntBASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BLOC1S4Q9NUP1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC009477.1-201ENST00000452936 217 ntBASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF890P-202ENST00000530367 1156 ntBASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AF228730.6-201ENST00000641497 218 ntBASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC084121.3-201ENST00000641716 218 ntBASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AL109936.8-201ENST00000641772 604 ntBASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BLOC1S4Q9NUP1 AC087481.3-201ENST00000602886 1894 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms