Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.16□□□□□ -0.14
VRK1Q99986 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK1Q99986 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 KRT18P34-201ENST00000488218 1270 ntBASIC14.16□□□□□ -0.14
VRK1Q99986 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK1Q99986 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.16□□□□□ -0.14
VRK1Q99986 MIR4492-201ENST00000581627 80 ntBASIC14.16□□□□□ -0.14
VRK1Q99986 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.16□□□□□ -0.14
VRK1Q99986 AC008267.7-201ENST00000624570 1194 ntBASIC14.16□□□□□ -0.14
VRK1Q99986 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.16□□□□□ -0.14
VRK1Q99986 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.16□□□□□ -0.14
VRK1Q99986 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VRK1Q99986 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VRK1Q99986 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.15□□□□□ -0.14
VRK1Q99986 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.15□□□□□ -0.14
VRK1Q99986 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.15□□□□□ -0.14
VRK1Q99986 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.15□□□□□ -0.14
VRK1Q99986 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
VRK1Q99986 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 TNRC18P2-201ENST00000417666 2714 ntBASIC14.15□□□□□ -0.14
VRK1Q99986 AC073347.1-201ENST00000421633 2643 ntBASIC14.15□□□□□ -0.14
VRK1Q99986 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VRK1Q99986 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VRK1Q99986 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.15□□□□□ -0.14
VRK1Q99986 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.15□□□□□ -0.15
VRK1Q99986 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
VRK1Q99986 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.14□□□□□ -0.15
VRK1Q99986 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.14□□□□□ -0.15
VRK1Q99986 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VRK1Q99986 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
VRK1Q99986 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.14□□□□□ -0.15
VRK1Q99986 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VRK1Q99986 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms