Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC079776.4-201ENST00000511039 504 ntBASIC18.12■□□□□ 0.49
ERCC4Q92889 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.12■□□□□ 0.49
ERCC4Q92889 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.12■□□□□ 0.49
ERCC4Q92889 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.12■□□□□ 0.49
ERCC4Q92889 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.12■□□□□ 0.49
ERCC4Q92889 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ERCC4Q92889 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.12■□□□□ 0.49
ERCC4Q92889 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.12■□□□□ 0.49
ERCC4Q92889 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ERCC4Q92889 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.11■□□□□ 0.49
ERCC4Q92889 PRYP6-201ENST00000514804 343 ntBASIC18.11■□□□□ 0.49
ERCC4Q92889 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.11■□□□□ 0.49
ERCC4Q92889 MIR4321-201ENST00000592276 80 ntBASIC18.11■□□□□ 0.49
ERCC4Q92889 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.11■□□□□ 0.49
ERCC4Q92889 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 AC087481.3-201ENST00000602886 1894 ntBASIC18.11■□□□□ 0.49
ERCC4Q92889 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
ERCC4Q92889 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
ERCC4Q92889 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.11■□□□□ 0.49
ERCC4Q92889 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ERCC4Q92889 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms