Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCG3Q8WXD2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 MIR648-201ENST00000385046 94 ntBASIC16.4■□□□□ 0.22
SCG3Q8WXD2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 LINC02084-201ENST00000606069 1096 ntBASIC16.4■□□□□ 0.22
SCG3Q8WXD2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 TCAF2P1-201ENST00000291129 2421 ntBASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCG3Q8WXD2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SCG3Q8WXD2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SCG3Q8WXD2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.39■□□□□ 0.22
SCG3Q8WXD2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 FAM45BP-202ENST00000592932 1624 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 SPCS2P4-201ENST00000436160 681 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 KRT18P34-201ENST00000488218 1270 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 RNA5SP421-201ENST00000516864 134 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 AL512356.2-201ENST00000546955 174 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 AP001059.3-201ENST00000619053 235 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 Z92544.3-201ENST00000624747 417 ntBASIC16.39■□□□□ 0.21
SCG3Q8WXD2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCG3Q8WXD2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms