Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 AC010491.1-201ENST00000563101 2797 ntBASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCNB3Q8WWL7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 AC009486.1-201ENST00000569860 813 ntBASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 HTR7P1-202ENST00000624664 4411 ntBASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCNB3Q8WWL7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 BAATP1-201ENST00000412284 1225 ntBASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 AL355994.2-201ENST00000447882 704 ntBASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 FTH1P14-201ENST00000482930 551 ntBASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 RNA5SP412-201ENST00000516234 123 ntBASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 TUBB1P2-201ENST00000422712 1306 ntBASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 TUBB1P1-201ENST00000503144 1300 ntBASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNB3Q8WWL7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
CCNB3Q8WWL7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CCNB3Q8WWL7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 AP001063.1-201ENST00000568332 529 ntBASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCNB3Q8WWL7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCNB3Q8WWL7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCNB3Q8WWL7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC24.19■■□□□ 1.46
CCNB3Q8WWL7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC24.19■■□□□ 1.46
CCNB3Q8WWL7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms