Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 FAM86GP-201ENST00000448322 971 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 MIR4453-201ENST00000584019 89 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 AC015911.4-201ENST00000588022 1070 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 AC021321.1-201ENST00000607397 1113 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 MIR6080-201ENST00000617359 66 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.21■□□□□ 0.19
PTCD2Q8WV60 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCD2Q8WV60 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTCD2Q8WV60 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.21■□□□□ 0.18
PTCD2Q8WV60 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PTCD2Q8WV60 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.21■□□□□ 0.18
PTCD2Q8WV60 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTCD2Q8WV60 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTCD2Q8WV60 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 HLA-H-201ENST00000383620 1096 ntBASIC16.2■□□□□ 0.18
PTCD2Q8WV60 MIR770-201ENST00000390219 98 ntBASIC16.2■□□□□ 0.18
PTCD2Q8WV60 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 RARRES2P9-201ENST00000565168 469 ntBASIC16.2■□□□□ 0.18
PTCD2Q8WV60 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCD2Q8WV60 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 AL691432.1-201ENST00000596308 1422 ntBASIC16.19■□□□□ 0.18
PTCD2Q8WV60 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 AC134407.2-201ENST00000625089 1978 ntBASIC16.19■□□□□ 0.18
PTCD2Q8WV60 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTCD2Q8WV60 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms