Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.73□□□□□ -0.05
CT55Q8WUE5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.73□□□□□ -0.05
CT55Q8WUE5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CT55Q8WUE5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.73□□□□□ -0.05
CT55Q8WUE5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 MSTO2P-201ENST00000314835 1709 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC134312.5-201ENST00000568031 1313 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC092933.1-201ENST00000393644 945 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 RPL7P3-201ENST00000441388 714 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC012441.1-201ENST00000446669 685 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC007551.1-201ENST00000457394 519 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 FTH1P14-201ENST00000482930 551 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AD000864.1-201ENST00000624076 2295 ntBASIC14.72□□□□□ -0.05
CT55Q8WUE5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CT55Q8WUE5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CT55Q8WUE5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 CSF2RBP1-201ENST00000447905 391 ntBASIC14.71□□□□□ -0.05
CT55Q8WUE5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CT55Q8WUE5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 AC106760.1-201ENST00000508690 800 ntBASIC14.71□□□□□ -0.05
CT55Q8WUE5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 AL583810.1-201ENST00000553344 1045 ntBASIC14.71□□□□□ -0.05
CT55Q8WUE5 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.71□□□□□ -0.05
CT55Q8WUE5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms