Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 AC005363.2-201ENST00000618631 242 ntBASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 AL590787.1-201ENST00000568856 1315 ntBASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TOP3BP1-201ENST00000420768 1380 ntBASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD2Q8IV50 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 PPT1-213ENST00000641319 2388 ntBASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 AC011477.6-201ENST00000604980 1927 ntBASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 AC005622.1-201ENST00000636801 1703 ntBASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 ST20-AS1-201ENST00000560255 4223 ntBASIC14.02□□□□□ -0.16
LYSMD2Q8IV50 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 AK4P3-201ENST00000418260 669 ntBASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LYSMD2Q8IV50 KRT8P26-201ENST00000534154 1276 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms