Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AL391256.1-201ENST00000443260 1855 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 FAM185BP-201ENST00000443595 716 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AL513480.1-201ENST00000451731 511 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AC087641.1-201ENST00000557561 1021 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AC034105.1-201ENST00000563488 319 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 OR7E47P-204ENST00000575924 449 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AC005912.2-201ENST00000619492 2400 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 AC131009.4-201ENST00000624048 1740 ntBASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM53Q6P2H8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AC006277.1-201ENST00000624348 1610 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AL591424.1-201ENST00000442569 1213 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 HCG4B-203ENST00000450128 991 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 RNA5SP416-201ENST00000516838 111 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AC106730.1-201ENST00000566722 1090 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AC007064.4-201ENST00000637740 555 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 Z82170.1-201ENST00000625081 3192 ntBASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM53Q6P2H8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 AC067930.6-201ENST00000623257 4947 ntBASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
TMEM53Q6P2H8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM53Q6P2H8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms