Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTL6Q6ICC9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AL391825.1-201ENST00000457671 1364 ntBASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AL136982.4-201ENST00000437689 1740 ntBASIC14.39□□□□□ -0.11
RTL6Q6ICC9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 SDHAP3-202ENST00000515467 728 ntBASIC14.39□□□□□ -0.11
RTL6Q6ICC9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 MIR4321-201ENST00000592276 80 ntBASIC14.39□□□□□ -0.11
RTL6Q6ICC9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 MIR6069-201ENST00000620069 79 ntBASIC14.39□□□□□ -0.11
RTL6Q6ICC9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AL109936.8-201ENST00000641772 604 ntBASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RTL6Q6ICC9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ME2P1-201ENST00000426028 1970 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AL589987.1-201ENST00000453380 819 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AC093004.1-201ENST00000508850 424 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTL6Q6ICC9 AL365330.1-201ENST00000607459 531 ntBASIC14.38□□□□□ -0.11
RTL6Q6ICC9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms