Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KRT18P67-201ENST00000432816 1264 ntBASIC15.43■□□□□ 0.06
RNF220Q5VTB9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 IGHV3-65-201ENST00000523210 341 ntBASIC15.43■□□□□ 0.06
RNF220Q5VTB9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 AC005412.3-201ENST00000580309 715 ntBASIC15.43■□□□□ 0.06
RNF220Q5VTB9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 SLC22A20-204ENST00000530038 1673 ntBASIC15.43■□□□□ 0.06
RNF220Q5VTB9 REXO1L2P-201ENST00000425429 2069 ntBASIC15.43■□□□□ 0.06
RNF220Q5VTB9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF220Q5VTB9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AC013726.1-201ENST00000563747 2285 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 DUSP5P1-201ENST00000441325 1139 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 FAM197Y8-203ENST00000450145 560 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 EMBP1-201ENST00000458200 901 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AF186996.4-201ENST00000467186 377 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AC105339.3-201ENST00000560043 636 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 CYP2A7P1-201ENST00000595391 815 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AL356488.2-201ENST00000602755 427 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 AL512652.2-201ENST00000625156 1716 ntBASIC15.42■□□□□ 0.06
RNF220Q5VTB9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF220Q5VTB9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 LINC01230-201ENST00000625222 3017 ntBASIC15.41■□□□□ 0.06
RNF220Q5VTB9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF220Q5VTB9 DGCR9-201ENST00000609630 2415 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms