Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 FAM8A3P-201ENST00000427218 844 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 AL512638.1-201ENST00000457493 794 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 AC135586.1-201ENST00000539323 574 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 SPCS2P1-201ENST00000561636 679 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 AC015910.1-201ENST00000579400 975 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 AL355385.1-201ENST00000606123 409 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 TMBIM7P-203ENST00000641617 1718 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 PAUPAR-201ENST00000630360 2965 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC27Q2M243 SSR4P1-203ENST00000599569 2260 ntBASIC20.6■□□□□ 0.89
CCDC27Q2M243 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC27Q2M243 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 AC022532.1-201ENST00000624563 1728 ntBASIC20.59■□□□□ 0.89
CCDC27Q2M243 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 AL133267.1-201ENST00000398220 340 ntBASIC20.59■□□□□ 0.89
CCDC27Q2M243 BCRP1-201ENST00000444246 691 ntBASIC20.59■□□□□ 0.89
CCDC27Q2M243 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 AC000095.1-201ENST00000603208 874 ntBASIC20.59■□□□□ 0.89
CCDC27Q2M243 AL096865.1-201ENST00000606796 927 ntBASIC20.59■□□□□ 0.89
CCDC27Q2M243 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC27Q2M243 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC27Q2M243 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC27Q2M243 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC27Q2M243 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC27Q2M243 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC27Q2M243 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.58■□□□□ 0.89
CCDC27Q2M243 AL589987.1-201ENST00000453380 819 ntBASIC20.58■□□□□ 0.89
CCDC27Q2M243 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC27Q2M243 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC27Q2M243 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC27Q2M243 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC27Q2M243 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CCDC27Q2M243 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC27Q2M243 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC27Q2M243 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC27Q2M243 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC27Q2M243 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC27Q2M243 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC27Q2M243 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC27Q2M243 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC27Q2M243 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC27Q2M243 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC27Q2M243 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC27Q2M243 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms