Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 PPT1-215ENST00000641471 2368 ntBASIC16.95■□□□□ 0.3
GCNT1Q02742 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
GCNT1Q02742 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.95■□□□□ 0.3
GCNT1Q02742 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.95■□□□□ 0.3
GCNT1Q02742 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GCNT1Q02742 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.95■□□□□ 0.3
GCNT1Q02742 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 AC074338.1-201ENST00000416825 156 ntBASIC16.94■□□□□ 0.3
GCNT1Q02742 AL645939.2-201ENST00000427340 991 ntBASIC16.94■□□□□ 0.3
GCNT1Q02742 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.94■□□□□ 0.3
GCNT1Q02742 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 AC092580.3-201ENST00000430932 139 ntBASIC16.94■□□□□ 0.3
GCNT1Q02742 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.94■□□□□ 0.3
GCNT1Q02742 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.94■□□□□ 0.3
GCNT1Q02742 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 AL512361.1-201ENST00000554200 418 ntBASIC16.94■□□□□ 0.3
GCNT1Q02742 AC010336.2-201ENST00000564226 506 ntBASIC16.94■□□□□ 0.3
GCNT1Q02742 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.94■□□□□ 0.3
GCNT1Q02742 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.94■□□□□ 0.3
GCNT1Q02742 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.94■□□□□ 0.3
GCNT1Q02742 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GCNT1Q02742 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GCNT1Q02742 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GCNT1Q02742 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.94■□□□□ 0.3
GCNT1Q02742 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GCNT1Q02742 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.93■□□□□ 0.3
GCNT1Q02742 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GCNT1Q02742 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GCNT1Q02742 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.93■□□□□ 0.3
GCNT1Q02742 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.93■□□□□ 0.3
GCNT1Q02742 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.93■□□□□ 0.3
GCNT1Q02742 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GCNT1Q02742 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.93■□□□□ 0.3
GCNT1Q02742 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GCNT1Q02742 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms