Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 FOSL1P1-201ENST00000511041 816 ntBASIC13.15□□□□□ -0.3
SUPT4H1P63272 AC136632.2-201ENST00000512891 861 ntBASIC13.15□□□□□ -0.3
SUPT4H1P63272 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 AC002347.1-201ENST00000569543 541 ntBASIC13.15□□□□□ -0.3
SUPT4H1P63272 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.15□□□□□ -0.3
SUPT4H1P63272 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUPT4H1P63272 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.15□□□□□ -0.31
SUPT4H1P63272 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SUPT4H1P63272 AC073439.1-201ENST00000624121 1774 ntBASIC13.15□□□□□ -0.31
SUPT4H1P63272 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.15□□□□□ -0.31
SUPT4H1P63272 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 AL645939.2-201ENST00000427340 991 ntBASIC13.14□□□□□ -0.31
SUPT4H1P63272 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SCARNA2-201ENST00000458748 420 ntBASIC13.14□□□□□ -0.31
SUPT4H1P63272 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUPT4H1P63272 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
SUPT4H1P63272 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.13□□□□□ -0.31
SUPT4H1P63272 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SUPT4H1P63272 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SUPT4H1P63272 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SUPT4H1P63272 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.13□□□□□ -0.31
SUPT4H1P63272 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms