Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 AC134407.2-201ENST00000625089 1978 ntBASIC14.07□□□□□ -0.16
CCR9P51686 GRK6P1-201ENST00000400595 1711 ntBASIC14.07□□□□□ -0.16
CCR9P51686 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.07□□□□□ -0.16
CCR9P51686 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
CCR9P51686 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 AC098831.1-202ENST00000438821 336 ntBASIC14.07□□□□□ -0.16
CCR9P51686 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 PRYP6-201ENST00000514804 343 ntBASIC14.07□□□□□ -0.16
CCR9P51686 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CCR9P51686 AL773604.1-201ENST00000617417 272 ntBASIC14.07□□□□□ -0.16
CCR9P51686 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CCR9P51686 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 AL359258.3-201ENST00000622910 2331 ntBASIC14.07□□□□□ -0.16
CCR9P51686 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCR9P51686 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCR9P51686 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCR9P51686 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 AL161772.1-201ENST00000610494 4412 ntBASIC14.06□□□□□ -0.16
CCR9P51686 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.06□□□□□ -0.16
CCR9P51686 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.06□□□□□ -0.16
CCR9P51686 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCR9P51686 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.06□□□□□ -0.16
CCR9P51686 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.06□□□□□ -0.16
CCR9P51686 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 AL161645.1-201ENST00000622716 1255 ntBASIC14.06□□□□□ -0.16
CCR9P51686 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCR9P51686 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.06□□□□□ -0.16
CCR9P51686 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
CCR9P51686 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCR9P51686 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCR9P51686 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.05□□□□□ -0.16
CCR9P51686 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCR9P51686 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms