Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.88■□□□□ 0.29
CTNNA1P35221 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.88■□□□□ 0.29
CTNNA1P35221 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 AL109954.1-202ENST00000564051 2148 ntBASIC16.88■□□□□ 0.29
CTNNA1P35221 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTNNA1P35221 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTNNA1P35221 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.88■□□□□ 0.29
CTNNA1P35221 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.87■□□□□ 0.29
CTNNA1P35221 PDPK2P-202ENST00000562415 1191 ntBASIC16.87■□□□□ 0.29
CTNNA1P35221 AP002472.1-201ENST00000577490 586 ntBASIC16.87■□□□□ 0.29
CTNNA1P35221 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 AC073389.1-201ENST00000595595 795 ntBASIC16.87■□□□□ 0.29
CTNNA1P35221 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.87■□□□□ 0.29
CTNNA1P35221 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.87■□□□□ 0.29
CTNNA1P35221 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
CTNNA1P35221 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTNNA1P35221 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 AC105250.1-201ENST00000509378 2057 ntBASIC16.86■□□□□ 0.29
CTNNA1P35221 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.86■□□□□ 0.29
CTNNA1P35221 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.86■□□□□ 0.29
CTNNA1P35221 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.86■□□□□ 0.29
CTNNA1P35221 AC099522.2-201ENST00000607001 744 ntBASIC16.86■□□□□ 0.29
CTNNA1P35221 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.86■□□□□ 0.29
CTNNA1P35221 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.86■□□□□ 0.29
CTNNA1P35221 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms