Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
HTR1EP28566 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 AP002414.2-201ENST00000591780 3365 ntBASIC15.31■□□□□ 0.04
HTR1EP28566 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTR1EP28566 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.31■□□□□ 0.04
HTR1EP28566 AC004461.1-201ENST00000412461 403 ntBASIC15.31■□□□□ 0.04
HTR1EP28566 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR1EP28566 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.31■□□□□ 0.04
HTR1EP28566 AC245100.5-201ENST00000452108 331 ntBASIC15.31■□□□□ 0.04
HTR1EP28566 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR1EP28566 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR1EP28566 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR1EP28566 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTR1EP28566 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR1EP28566 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.31■□□□□ 0.04
HTR1EP28566 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.31■□□□□ 0.04
HTR1EP28566 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTR1EP28566 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
HTR1EP28566 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR1EP28566 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
HTR1EP28566 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
HTR1EP28566 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR1EP28566 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR1EP28566 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR1EP28566 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR1EP28566 FAM86GP-201ENST00000448322 971 ntBASIC15.3■□□□□ 0.04
HTR1EP28566 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 AC190387.1-201ENST00000551683 408 ntBASIC15.3■□□□□ 0.04
HTR1EP28566 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR1EP28566 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.3■□□□□ 0.04
HTR1EP28566 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 AC090616.6-203ENST00000579186 1945 ntBASIC15.3■□□□□ 0.04
HTR1EP28566 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR1EP28566 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR1EP28566 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 AC105339.1-204ENST00000636249 355 ntBASIC15.3■□□□□ 0.04
HTR1EP28566 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1EP28566 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1EP28566 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.29■□□□□ 0.04
HTR1EP28566 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HTR1EP28566 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HTR1EP28566 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1EP28566 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms