Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
KRT4P19013 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KRT4P19013 HCG4P8-203ENST00000443049 980 ntBASIC16.04■□□□□ 0.16
KRT4P19013 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 KRT18P35-201ENST00000510488 1269 ntBASIC16.04■□□□□ 0.16
KRT4P19013 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT4P19013 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KRT4P19013 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT4P19013 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KRT4P19013 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 AC018892.3-201ENST00000623986 2499 ntBASIC16.04■□□□□ 0.16
KRT4P19013 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT4P19013 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT4P19013 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
KRT4P19013 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT4P19013 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 WASH6P-202ENST00000359512 1437 ntBASIC16.03■□□□□ 0.16
KRT4P19013 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT4P19013 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.03■□□□□ 0.16
KRT4P19013 GPX1P2-201ENST00000429271 606 ntBASIC16.03■□□□□ 0.16
KRT4P19013 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 AC109635.5-201ENST00000533593 962 ntBASIC16.03■□□□□ 0.16
KRT4P19013 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT4P19013 AC012640.2-201ENST00000561606 901 ntBASIC16.03■□□□□ 0.16
KRT4P19013 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT4P19013 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT4P19013 AL078644.1-201ENST00000609881 752 ntBASIC16.03■□□□□ 0.16
KRT4P19013 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT4P19013 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT4P19013 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
KRT4P19013 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KRT4P19013 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT4P19013 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT4P19013 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
KRT4P19013 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms