Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.77■□□□□ 0.28
LCP1P13796 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.77■□□□□ 0.28
LCP1P13796 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCP1P13796 HYMAI-201ENST00000635591 3347 ntBASIC16.77■□□□□ 0.27
LCP1P13796 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCP1P13796 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCP1P13796 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.77■□□□□ 0.27
LCP1P13796 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
LCP1P13796 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.77■□□□□ 0.27
LCP1P13796 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCP1P13796 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCP1P13796 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCP1P13796 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.76■□□□□ 0.27
LCP1P13796 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.76■□□□□ 0.27
LCP1P13796 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.76■□□□□ 0.27
LCP1P13796 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.76■□□□□ 0.27
LCP1P13796 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.76■□□□□ 0.27
LCP1P13796 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.76■□□□□ 0.27
LCP1P13796 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 AC004890.2-204ENST00000481968 304 ntBASIC16.76■□□□□ 0.27
LCP1P13796 INGX-202ENST00000489074 768 ntBASIC16.76■□□□□ 0.27
LCP1P13796 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.76■□□□□ 0.27
LCP1P13796 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.76■□□□□ 0.27
LCP1P13796 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.76■□□□□ 0.27
LCP1P13796 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 AC132872.4-202ENST00000622924 2756 ntBASIC16.76■□□□□ 0.27
LCP1P13796 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCP1P13796 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
LCP1P13796 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.75■□□□□ 0.27
LCP1P13796 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.75■□□□□ 0.27
LCP1P13796 RNA5SP421-201ENST00000516864 134 ntBASIC16.75■□□□□ 0.27
LCP1P13796 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 AC044860.1-202ENST00000559481 777 ntBASIC16.75■□□□□ 0.27
LCP1P13796 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.75■□□□□ 0.27
LCP1P13796 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.75■□□□□ 0.27
LCP1P13796 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.75■□□□□ 0.27
LCP1P13796 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LCP1P13796 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.75■□□□□ 0.27
LCP1P13796 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LCP1P13796 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LCP1P13796 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LCP1P13796 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LCP1P13796 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.75■□□□□ 0.27
LCP1P13796 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LCP1P13796 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 280.1 ms