Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM3P06753 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM3P06753 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM3P06753 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TPM3P06753 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TPM3P06753 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 C18orf15-201ENST00000623680 2534 ntBASIC17.94■□□□□ 0.46
TPM3P06753 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TPM3P06753 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 KRT18P21-201ENST00000515767 1272 ntBASIC17.93■□□□□ 0.46
TPM3P06753 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.93■□□□□ 0.46
TPM3P06753 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
TPM3P06753 AC091076.1-201ENST00000610741 619 ntBASIC17.93■□□□□ 0.46
TPM3P06753 AL121772.3-201ENST00000610840 674 ntBASIC17.93■□□□□ 0.46
TPM3P06753 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.93■□□□□ 0.46
TPM3P06753 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.93■□□□□ 0.46
TPM3P06753 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TPM3P06753 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TPM3P06753 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.93■□□□□ 0.46
TPM3P06753 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TPM3P06753 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TPM3P06753 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TPM3P06753 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 AC245100.5-201ENST00000452108 331 ntBASIC17.92■□□□□ 0.46
TPM3P06753 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM3P06753 AC107918.4-202ENST00000641623 219 ntBASIC17.92■□□□□ 0.46
TPM3P06753 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM3P06753 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM3P06753 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TPM3P06753 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TPM3P06753 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM3P06753 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM3P06753 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TPM3P06753 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 AC005912.2-201ENST00000619492 2400 ntBASIC17.91■□□□□ 0.46
TPM3P06753 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 AC091951.1-201ENST00000512854 2465 ntBASIC17.91■□□□□ 0.46
TPM3P06753 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms