Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.4□□□□□ -0.1
HLA-DPB1P04440 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AC034105.1-201ENST00000563488 319 ntBASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AC106881.1-201ENST00000605849 3329 ntBASIC14.4□□□□□ -0.1
HLA-DPB1P04440 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.39□□□□□ -0.11
HLA-DPB1P04440 HCG4-201ENST00000418983 998 ntBASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AC007967.2-201ENST00000432613 625 ntBASIC14.39□□□□□ -0.11
HLA-DPB1P04440 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 PRSS29P-201ENST00000440800 595 ntBASIC14.39□□□□□ -0.11
HLA-DPB1P04440 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 VN2R19P-201ENST00000442399 1052 ntBASIC14.39□□□□□ -0.11
HLA-DPB1P04440 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AC145285.3-201ENST00000564603 959 ntBASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPB1P04440 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms