Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.12■□□□□ 0.33
TUBB4AP04350 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
TUBB4AP04350 BX005266.1-201ENST00000473402 457 ntBASIC17.12■□□□□ 0.33
TUBB4AP04350 AL136038.3-201ENST00000561909 1096 ntBASIC17.12■□□□□ 0.33
TUBB4AP04350 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TUBB4AP04350 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.12■□□□□ 0.33
TUBB4AP04350 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 AC004706.3-202ENST00000621574 984 ntBASIC17.12■□□□□ 0.33
TUBB4AP04350 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBB4AP04350 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TUBB4AP04350 CICP14-201ENST00000629111 2732 ntBASIC17.12■□□□□ 0.33
TUBB4AP04350 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBB4AP04350 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 SBF1P1-201ENST00000444527 5631 ntBASIC17.11■□□□□ 0.33
TUBB4AP04350 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBB4AP04350 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBB4AP04350 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.11■□□□□ 0.33
TUBB4AP04350 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TUBB4AP04350 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TUBB4AP04350 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 DRAXINP1-201ENST00000437611 948 ntBASIC17.11■□□□□ 0.33
TUBB4AP04350 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.11■□□□□ 0.33
TUBB4AP04350 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBB4AP04350 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 AL805961.1-202ENST00000641562 540 ntBASIC17.11■□□□□ 0.33
TUBB4AP04350 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBB4AP04350 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBB4AP04350 BX640514.1-201ENST00000583223 1918 ntBASIC17.11■□□□□ 0.33
TUBB4AP04350 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBB4AP04350 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBB4AP04350 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBB4AP04350 AL359881.3-201ENST00000602640 1721 ntBASIC17.1■□□□□ 0.33
TUBB4AP04350 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBB4AP04350 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBB4AP04350 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TUBB4AP04350 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBB4AP04350 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TUBB4AP04350 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBB4AP04350 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBB4AP04350 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBB4AP04350 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBB4AP04350 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBB4AP04350 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBB4AP04350 GGTLC5P-201ENST00000617623 998 ntBASIC17.1■□□□□ 0.33
TUBB4AP04350 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBB4AP04350 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TUBB4AP04350 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms