Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.43□□□□□ -0.26
CD74P04233 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD74P04233 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CD74P04233 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CD74P04233 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.42□□□□□ -0.26
CD74P04233 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CD74P04233 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 AC007686.3-201ENST00000619017 3487 ntBASIC13.42□□□□□ -0.26
CD74P04233 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CD74P04233 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.42□□□□□ -0.26
CD74P04233 FAM8A3P-201ENST00000427218 844 ntBASIC13.42□□□□□ -0.26
CD74P04233 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 IGHV3-65-201ENST00000523210 341 ntBASIC13.42□□□□□ -0.26
CD74P04233 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.42□□□□□ -0.26
CD74P04233 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.42□□□□□ -0.26
CD74P04233 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.42□□□□□ -0.26
CD74P04233 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CD74P04233 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CD74P04233 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.42□□□□□ -0.26
CD74P04233 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.42□□□□□ -0.26
CD74P04233 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD74P04233 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.41□□□□□ -0.26
CD74P04233 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD74P04233 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CD74P04233 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 AC073621.1-201ENST00000392730 636 ntBASIC13.41□□□□□ -0.26
CD74P04233 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 PCED1CP-201ENST00000419887 785 ntBASIC13.41□□□□□ -0.26
CD74P04233 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 FAM185BP-201ENST00000443595 716 ntBASIC13.41□□□□□ -0.26
CD74P04233 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.41□□□□□ -0.26
CD74P04233 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 AC002347.1-201ENST00000569543 541 ntBASIC13.41□□□□□ -0.26
CD74P04233 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 AL445228.2-201ENST00000605589 952 ntBASIC13.41□□□□□ -0.26
CD74P04233 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD74P04233 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.41□□□□□ -0.26
CD74P04233 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.41□□□□□ -0.26
CD74P04233 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.41□□□□□ -0.26
CD74P04233 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CD74P04233 AC107918.4-202ENST00000641623 219 ntBASIC13.41□□□□□ -0.26
CD74P04233 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
CD74P04233 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.41□□□□□ -0.26
CD74P04233 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD74P04233 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms