Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFAP04085 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PDGFAP04085 TUBB8P12-201ENST00000308911 1335 ntBASIC14.96□□□□□ -0.01
PDGFAP04085 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 TUBB7P-202ENST00000428444 1305 ntBASIC14.96□□□□□ -0.01
PDGFAP04085 TUBB8P7-204ENST00000567960 1332 ntBASIC14.96□□□□□ -0.01
PDGFAP04085 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PDGFAP04085 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
PDGFAP04085 AC055876.2-201ENST00000531834 546 ntBASIC14.96□□□□□ -0.01
PDGFAP04085 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 AC124947.2-201ENST00000547118 1133 ntBASIC14.96□□□□□ -0.01
PDGFAP04085 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.96□□□□□ -0.01
PDGFAP04085 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFAP04085 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.96□□□□□ -0.01
PDGFAP04085 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.96□□□□□ -0.01
PDGFAP04085 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.96□□□□□ -0.01
PDGFAP04085 AL033527.5-202ENST00000641632 1098 ntBASIC14.96□□□□□ -0.01
PDGFAP04085 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
PDGFAP04085 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDGFAP04085 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PDGFAP04085 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFAP04085 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFAP04085 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PDGFAP04085 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDGFAP04085 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
PDGFAP04085 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 AC092068.3-201ENST00000587894 2016 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.95□□□□□ -0.02
PDGFAP04085 AC098850.1-201ENST00000419919 790 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 TTTY23B-201ENST00000442790 549 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 MYCLP2-201ENST00000449268 967 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 ELK1P1-201ENST00000485699 580 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 TPRX2P-201ENST00000535362 881 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.95□□□□□ -0.02
PDGFAP04085 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.95□□□□□ -0.02
PDGFAP04085 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PDGFAP04085 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.95□□□□□ -0.02
PDGFAP04085 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PDGFAP04085 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDGFAP04085 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms