Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFBP01127 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PDGFBP01127 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.8■□□□□ 0.12
PDGFBP01127 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PDGFBP01127 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PDGFBP01127 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.8■□□□□ 0.12
PDGFBP01127 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 AC079178.1-201ENST00000420915 656 ntBASIC15.8■□□□□ 0.12
PDGFBP01127 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.8■□□□□ 0.12
PDGFBP01127 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.8■□□□□ 0.12
PDGFBP01127 AC012618.1-201ENST00000461223 412 ntBASIC15.8■□□□□ 0.12
PDGFBP01127 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFBP01127 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.8■□□□□ 0.12
PDGFBP01127 RN7SL736P-201ENST00000613111 269 ntBASIC15.8■□□□□ 0.12
PDGFBP01127 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
PDGFBP01127 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.8■□□□□ 0.12
PDGFBP01127 PCDHB18P-201ENST00000524813 2368 ntBASIC15.8■□□□□ 0.12
PDGFBP01127 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.8■□□□□ 0.12
PDGFBP01127 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDGFBP01127 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.8■□□□□ 0.12
PDGFBP01127 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PDGFBP01127 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 TPM3P8-201ENST00000330554 643 ntBASIC15.79■□□□□ 0.12
PDGFBP01127 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.79■□□□□ 0.12
PDGFBP01127 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFBP01127 AC245100.5-201ENST00000452108 331 ntBASIC15.79■□□□□ 0.12
PDGFBP01127 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFBP01127 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
PDGFBP01127 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.79■□□□□ 0.12
PDGFBP01127 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.79■□□□□ 0.12
PDGFBP01127 AC073352.2-201ENST00000609385 439 ntBASIC15.79■□□□□ 0.12
PDGFBP01127 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.79■□□□□ 0.12
PDGFBP01127 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.79■□□□□ 0.12
PDGFBP01127 AC244157.2-201ENST00000616239 1006 ntBASIC15.79■□□□□ 0.12
PDGFBP01127 HLA-A-202ENST00000376806 1854 ntBASIC15.79■□□□□ 0.12
PDGFBP01127 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.79■□□□□ 0.12
PDGFBP01127 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
PDGFBP01127 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDGFBP01127 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PDGFBP01127 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
PDGFBP01127 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 AC134407.2-201ENST00000625089 1978 ntBASIC15.78■□□□□ 0.12
PDGFBP01127 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 PP12613-201ENST00000424958 2230 ntBASIC15.78■□□□□ 0.12
PDGFBP01127 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms