Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 ACKR1-201ENST00000368121 1240 ntBASIC16.7■□□□□ 0.26
C1RP00736 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.7■□□□□ 0.26
C1RP00736 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.7■□□□□ 0.26
C1RP00736 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
C1RP00736 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 CROCCP4-201ENST00000457096 498 ntBASIC16.7■□□□□ 0.26
C1RP00736 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.7■□□□□ 0.26
C1RP00736 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.7■□□□□ 0.26
C1RP00736 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.7■□□□□ 0.26
C1RP00736 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.7■□□□□ 0.26
C1RP00736 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C1RP00736 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
C1RP00736 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.7■□□□□ 0.26
C1RP00736 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.7■□□□□ 0.26
C1RP00736 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
C1RP00736 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1RP00736 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 CROCCP1-201ENST00000426910 5675 ntBASIC16.69■□□□□ 0.26
C1RP00736 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.69■□□□□ 0.26
C1RP00736 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.69■□□□□ 0.26
C1RP00736 RPL7P3-201ENST00000441388 714 ntBASIC16.69■□□□□ 0.26
C1RP00736 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.69■□□□□ 0.26
C1RP00736 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.69■□□□□ 0.26
C1RP00736 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.69■□□□□ 0.26
C1RP00736 TDH-203ENST00000531764 1110 ntBASIC16.69■□□□□ 0.26
C1RP00736 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.69■□□□□ 0.26
C1RP00736 AC079316.1-201ENST00000548397 411 ntBASIC16.69■□□□□ 0.26
C1RP00736 AL583810.1-201ENST00000553344 1045 ntBASIC16.69■□□□□ 0.26
C1RP00736 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.69■□□□□ 0.26
C1RP00736 AL450472.2-201ENST00000603663 1156 ntBASIC16.69■□□□□ 0.26
C1RP00736 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.69■□□□□ 0.26
C1RP00736 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.69■□□□□ 0.26
C1RP00736 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
C1RP00736 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1RP00736 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.69■□□□□ 0.26
C1RP00736 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
C1RP00736 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.68■□□□□ 0.26
C1RP00736 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
C1RP00736 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
C1RP00736 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C1RP00736 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.68■□□□□ 0.26
C1RP00736 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.68■□□□□ 0.26
C1RP00736 HAUS4P1-201ENST00000406739 1145 ntBASIC16.68■□□□□ 0.26
C1RP00736 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
C1RP00736 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.68■□□□□ 0.26
C1RP00736 AP001889.1-201ENST00000525414 633 ntBASIC16.68■□□□□ 0.26
C1RP00736 AC068587.3-201ENST00000526613 355 ntBASIC16.68■□□□□ 0.26
C1RP00736 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.68■□□□□ 0.26
C1RP00736 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.68■□□□□ 0.26
C1RP00736 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms