Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 GRK6P1-201ENST00000400595 1711 ntBASIC16.2■□□□□ 0.18
RIPK2O43353 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RIPK2O43353 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.2■□□□□ 0.18
RIPK2O43353 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 FAM210CP-201ENST00000445714 574 ntBASIC16.2■□□□□ 0.18
RIPK2O43353 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 BNIP3P1-202ENST00000550043 1585 ntBASIC16.2■□□□□ 0.18
RIPK2O43353 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 REXO1L1P-202ENST00000608646 1974 ntBASIC16.2■□□□□ 0.18
RIPK2O43353 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.19■□□□□ 0.18
RIPK2O43353 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.19■□□□□ 0.18
RIPK2O43353 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.19■□□□□ 0.18
RIPK2O43353 AC243562.2-201ENST00000561247 970 ntBASIC16.19■□□□□ 0.18
RIPK2O43353 MIR4751-201ENST00000578027 74 ntBASIC16.19■□□□□ 0.18
RIPK2O43353 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.19■□□□□ 0.18
RIPK2O43353 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 AC117500.6-201ENST00000624871 588 ntBASIC16.19■□□□□ 0.18
RIPK2O43353 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.19■□□□□ 0.18
RIPK2O43353 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.19■□□□□ 0.18
RIPK2O43353 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RIPK2O43353 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RIPK2O43353 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
RIPK2O43353 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RIPK2O43353 AL691432.1-201ENST00000596308 1422 ntBASIC16.19■□□□□ 0.18
RIPK2O43353 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.18■□□□□ 0.18
RIPK2O43353 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RIPK2O43353 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
RIPK2O43353 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RIPK2O43353 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RIPK2O43353 AC139749.1-202ENST00000617529 3139 ntBASIC16.18■□□□□ 0.18
RIPK2O43353 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms