Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 MRPL20P1-201ENST00000400819 433 ntBASIC14.9□□□□□ -0.02
ARHGEF9O43307 AC244107.1-201ENST00000442033 332 ntBASIC14.9□□□□□ -0.02
ARHGEF9O43307 VN2R19P-201ENST00000442399 1052 ntBASIC14.9□□□□□ -0.02
ARHGEF9O43307 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 KRT18P2-201ENST00000447938 1258 ntBASIC14.9□□□□□ -0.02
ARHGEF9O43307 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.9□□□□□ -0.02
ARHGEF9O43307 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ARHGEF9O43307 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.9□□□□□ -0.02
ARHGEF9O43307 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 HCG4-201ENST00000418983 998 ntBASIC14.89□□□□□ -0.03
ARHGEF9O43307 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PRSS29P-201ENST00000440800 595 ntBASIC14.89□□□□□ -0.03
ARHGEF9O43307 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ELL2P1-201ENST00000413990 1906 ntBASIC14.89□□□□□ -0.03
ARHGEF9O43307 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 CICP13-201ENST00000422015 2789 ntBASIC14.89□□□□□ -0.03
ARHGEF9O43307 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ARHGEF9O43307 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ARHGEF9O43307 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms